-IT and data storage problems. at your College / University / Conference then feel free to write to us at workshops@biodiscoverygroup.com. This workshop has been redesigned and adapted to the needs of beginners in the field of NGS bioinformatics and comprises this three course modules: Dr. David Langenberger (ecSeq Bioinformatics GmbH)David started working with small non-coding RNAs in 2006. But, with an online workshop, you will obviously have to organise and plan much less. We will start every morning at 9am sharp and work together until 5pm in the afternoon. The course is indeed highly informative for the beginners to NGS. Location: Online Prerequisites International and Ethnic Workshop Sessions: Swedish Research Strategy Workshop – Speakers: Geoff Morris, AG and Savannah Larson Thought you knew a lot about Swedish research? If you have any problems with the online application process, please contact us. Excellent course, I highly recommended it. I found the instructors very approachable and willing to help. This can be obtained by various methods and is essential to fully benefit from the course. The workshops and training programs can be held on-site at the client’s location or online one to one. Virtual Second Workshop for the NGS-CN on the 17th of November . Meals and lodging perfect. The National Genealogical Society announced the results of its 2020 Board of Directors election at its annual meeting on 1 September 2020. Attendees will be contacted with further information shortly. 2020 dates(s): Monday, February 07 - 9am - 4pm Online Dates: Monday, October 12 - 9am - 4pm Location: During Covid-19: Online (WebEx or other) We only use open source tools that are free to use. -Making libraries from samples If you continue, we'll assume that you are happy to receive all cookies. As per available reports about 2 relevant journals, 1 Conference, 32 Workshops are presently dedicated exclusively to Next-generation sequencing and about 27 Open Access articles are being published on Next-generation sequencing.. DNA sequencing is the process of determining the precise order of nucleotides within a DNA molecule. Arrival, Registration and Opening Reception. We have tried to keep the differences between the online and the attendance courses as small as possible. For this virtual course, we plan to use a combination of video conferencing, streaming, and online and virtual machine (VM) teaching resources to deliver the different elements of the course as interactively as possible. No, you do not have to install any software to follow the course. Please click the Apply button above to begin the online application process. You will get access to a high performance computer in the cloud, which you can easily log into using an in-browser console. When you register for this workshop you are agreeing with our Workshop Terms and Conditions. A microphone and loudspeakers/headphones. Bengaluru | 2-Day Technical Bioinformatics Hands-on Workshop on NGS Data Analysis | DNA, RNA & MetaGenomics. The course was very comprehensive, professionally delivered, and completely met both my requirements and expectations. They are open to everyone registered to attend AMP 2020. Germany -Alignment to a reference, de-novo assembly, SNP and structural variant-calling of next generation DNA and RNA data Workshop on Basic and Advance Next Generation Sequencing (NGS) Data Analysis ... 21 March 2020. read alignment) and data formats; Use bioinformatics tools for handling NGS data; Perform first downstream analyses for studying genetic variation This course is not meant to replace the manufacturers’ training normally supplied with new instruments, nor is it intended to be a training course for those solely interested in next generation sequencing bioinformatics (please refer to our website for dedicated bioinformatics courses). For a optimal learning experience we carefully prepare our learning materials and example data. All necessary programs are already installed on this computer. If you would like to apply for a bursary, please complete the bursary section of the online application form. *The course fee is subsidised by Wellcome Genome Campus Advanced Courses and Scientific Conferences and applies to non-commercial applicants. If you want to conduct a Seminar or 1/2/3/5 days Workshop or 7/15 days short-term Training in Bioinformatics, Drug Discovery & Designing, MD Simulations, Next Generation Sequencing, Immunotechnology, Structural Biology, Agro informatics, etc. The workshop was perfectly prepared in all aspects - time planning on individual themes / calculations and examples, providing computers, USB … This way they can help you directly and without much detour. 2020 Applicants should be postdoctoral scientists, senior PhD students or junior faculty members actively engaged in or soon to commence research involving next generation sequencing instrumentation. More information. All workshop attendees will be enabled to perform important first tasks of NGS data analysis themselves. Where?Online. The Next Generation Sequencing Workshop™: Breast Cancer Edition is an interactive CME-certified program being held adjunct to the 37th Annual Miami Breast Cancer Conference®. Train at EMBL-EBI. Learn the essential computing skills for NGS bioinformatics; Understand NGS analysis algorithms (e.g. A variety of applications will be covered as time permits, e.g., RNA-Seq, target enrichment, bacterial sequencing, cancer genomics, human variation analysis, etc. (Statement of proficiency in bash shell accepted to attend other workshops.) Because up-to-date expert knowledge is needed to answer your questions and know what is important in the field. Please contact us for the commercial fee. Before the event: If you like to travel and get to know new cities, you will miss that in an online course. All workshop attendees will be enabled to perform important first tasks of NGS data analysis themselves. The purpose of this workshop is to get a deeper understanding in Next-Generation Sequencing (NGS) with a special focus on bioinformatics issues. -Overview: Motivation and fundamental concepts Since 2011 he specialized in the field of NGS data analysis and helped analysing sequencing data of several large consortium projects. NGS mappers), since not every software fits with every task/question. they explained everything from the basics down to the higher details about how each program actually works, on such an understandable level. -Detailed description of prominent sequencing technologies: current and future (3rd generation) platforms Next generation sequencing has become the premier tool in genetic and genomic analysis. The course will also feature a panel of distingushed guest speakers. Travel visas Seating is limited, so register early. Linux Essentials: Basics for NGS Data Analysis - $95 - $75 online during COVID19 (may be substituted by "Survival Bash" - see below.). This way, we can start right away. Language: English Previous News Stories When?March 25 - 27, 2020 Where?Munich, Germany Advance your research. The programme will include lecture and virtual sessions covering the following topics: Library Prep Workshop: October 14 - 16, 2020 (9 am - 5 pm CET) Please send me the ecSeq newsletter. We hope you will take advantage of them. A current desktop computer / laptop with an up-to-date browser (Firefox or Chrome) is required. Find out what time it is at your location: Time Difference, "Thoroughly enjoyed the NSG course in Munich. Please contact organizer for more details. The people attending to the course (instructors, assistants, speakers and participants) showed a scientific high level and were very nice. Note: The assistent can only see your in-browser terminal window but nothing else and also do not have any access to your computer. NGS workflow projects for teams will be introduced. All the basic techniques of post-sequencing analysis will be covered, QC, alignment, assembly, variant calling, etc. Oxford Gene Technology (OGT), A Sysmex Group Company, will be hosting a live workshop at the upcoming Association for Molecular Pathology (AMP) 2020 virtual meeting, in which users will explain how OGT’s SureSeq™ NGS panels can increase throughput and save time and cost in the detection of a wide variety of aberrations. Please note that both the applicant and sponsor are required to provide a justification for the bursary as part of the application. Linux-based workshops. If you want to conduct a Seminar or Workshop or short-term Training in Bioinformatics, Bio-IT, Next Generation Sequencing, Genomics, etc. Windows 10), Mac OS X 10.13 or later. Thanks to all the instructors, organizers, and people involved. Wednesday, November 18, 2020: 3:30pm - 4:30pm: Illumina Presents: Comprehensive Genomic Profiling from Liquid Biopsy Samples: 3:30pm - 4:30pm: Thermo Fisher Presents: Advances in NGS Automation Accelerates Time to Results for Myeloid and Comprehensive Genomic Profiling The ICGEB aims at strengthening the research capability of its Members through a comprehensive training programme and approach to promoting biotechnology internationally. There are numerous online introductory tutorials to the UNIX/Linux operating system and command line, including: How to Apply UCSC), Usage of important bioinformatics toolkits (BEDtools), Preprocessing of raw reads: quality control (FastQC), adapter clipping, quality trimming, Introduction to read mapping (Alignment methods, Mapping heuristics), Read mapping (BWA, BWA-MEM, Bowtie2, STAR, segemehl), Usage of important NGS toolkits (samtools). There are numerous online introductory tutorials to the UNIX/Linux operating system and command line, including: http://www.ee.surrey.ac.uk/Teaching/Unix Of course we'll help you. I would strongly recommend the workshop!" during the conference dinner) are unfortunately very limited. Additional funding opportunities It was fairly easy to follow even if one has not worked with linux before. Due to the Covid-19 pandemic this course will be delivered in a virtual format. This can be obtained by various methods and is essential to fully benefit from the course. Registrations for workshop are still open. – Illumina Miseq/HiSeq Travel and accommodation are not necessary. Feb 28, 2020 10:00 AM - Feb 29, 2020 05:00 PM (Asia/Kolkata) Awfis M.G. Canadian Bioinformatics Workshops: Summer 2020 Download the 2020 Schedule » 2020 Workshops ... Research assistant in bioinformatics/NGS analysis; PDF for for computational molecular dynamics simulation of lipid oxidation; Programmer Analyst; PhD student in … Check dates. The small excercises during the workshop were useful to internalize the contents. Linux Essentials for Next-Generation Sequencing Data Analysis. The organization, quality and course material was just great. I expressly agree to receive the newsletter and know that I can easily unsubscribe at any time. Speakers for the 2020 course will be announced shortly. The individual exercises build on each other, so you should not leave in between. The decision of the selection committee is final. Please visit the following websites for further information on visiting the UK: This is the best course I ever attended. Our on-site courses develop practical skills and knowledge. All workshop attendees will be enabled to perform important first tasks of NGS data analysis themselves. One of the following web browsers: Edge 42 and later, Chrome 65 or Later, Firefox 48 or Later. The course was great! D-04103 Leipzig -Data QC: How to determine if a run has performed well supervisor, line manager or head of department). You must bring your own laptop. They will be held in parallel on Friday, Day 3 of InCoB. 9 am - 5 pm (CEST) Applicants will be notified of a bursary award along with their place on the course, usually within one month of the application deadline. There will be regular short breaks and a longer break at lunchtime. This event has ended. I would recommend this course to anyone needing a good start in sequencing and large scale bioinformatics. Day 1 – Sunday May 31, 2020* Official Opening of GDW Workshop at 6 p.m. FASTA, BED) and databases (e.g. The course will include theoretical and practical information on all of the next-generation sequencing systems available and those on the near horizon. Our 3 days comprehensive Workshop on Next Generation Sequencing Data Analysis,Variant Calling, RNAseq, ChIPseq : A Practical Introduction aims at providing systematic Hands-on-Training on using Data Analysis application/tools for the NGS data. Advantages and disadvantages of current sequencing technologies and their implications on data analysis will be discovered. Applicants must ensure that their sponsor provides this supporting statement by the application deadline. The National Institute of Plant Genome Research is an autonomous institution supported by the Department of Biotechnology, Government of India. Available Seats: 15 (first-come, first-served), Registration Fee: 789 EUR (excluding VAT), Opening Date of Registration: February 1, 2020 Book online tickets for DELHI(NCR)| 2-Day Technical Hands-On Workshop In NGS Data Analysis & Genome Editing happening on 06 January 2020 at Gurugram, Level 2, Augusta Point, Golf Course Road, Parsvnath Exotica, Sector 53. But of course we will try to answer your questions online as well. Accompanying the lecture and practical sessions will be a series of seminars by invited speakers, who will highlight their ground-breaking work in the applications of next generation sequencing. Dr. Mario Fasold (ecSeq Bioinformatics GmbH)Mario works in the analysis of microarray data since 2007 and developed several bioinformatics tools such as the Bioconductor package AffyRNADegradation and the Larpack program package. Instructors were awesome, they made sure that we have fun and learning during this course. June 2020. There will be a Q&A moderator to whom you can write your question anytime. at your College/ University/ Conference then feel free to write to us at info@arraygen.com Note: required before taking any other workshop. They can also dial into your in-browser console and see exactly the same as what you see. -Hands-on laboratory work: preparing chips for sequencing and performing sequencing runs on various platforms, Data analysis Our trainers have a proven record of academic and/or industrial experience in NGS data analysis. Linux Basics workshop is required for all other workshops unless you have similar classes from DoIT or other department, or can assert proficiency. Bienvenidos – Welcome to NGS Hispanic Research Methodology Workshop The 2020 National Genealogical Society (NGS), Family History Conference will be held in Salt Lake City, Utah this May 20-23. 29 Advance your research. A computer with one of the following operatins systems: Windows 7 or later (incl. This activity will help you establish best practices for use of next-generation sequencing (NGS) testing in the diagnosis and care of your patients with breast cancer. For the data analysis components of the course, applicants will require a working knowledge of the UNIX/Linux operating system. – Oxford Nanopore MinION. A fundamental understanding of molecular biology (DNA, RNA, gene expression, PCR, ...) is assumed. Log into your account. Ratings from participants of our previous NGS Data Analysis: A Practical Introduction (3-day) workshops: Copyright © ecSeq Bioinformatics | Imprint  Privacy  Contact, Introduction to sequencing technologies from a data analysts view, Introduction to the command line and important commands, Combining commands by piping and redirection, Introduction to bioinformatics file formats (e.g. We use cookies to ensure we give you the best experience on our website. Successful applicants will be provided with a support letter for their visa application, if required. ICGEB-DBT Workshop “Re-designing Smart Crops for Sustainable Agriculture: Dynamics of CRISPR-Cas Breeding, NGS and beyond” New Delhi, India 26 – 30 April 2021 Meeting and Courses in 2020 Email: events@ecSeq.com. The trainers were open to all questions and took their time for all requests. This laboratory-based course is directed at scientists who will be generating and interpreting sequence information in their research and wish to gain a better understanding of the platforms and techniques involved, and their applications. It takes place in a different US city each year in the month of May, with a new theme, a new program of lectures, sessions, workshops, luncheons, and events. the 2021 course. This course has now closed Think again! Terms of use, Connect with us on Facebook (will open in a new window), Watch our videos on Youtube (will open in a new window), Follow us on Twitter (will open in a new window), Connect with us on LinkedIn (will open in a new window), http://swcarpentry.github.io/shell-novice/, Information for general visitors and business visitors. Closing Date of Registration: October 1, 2020 The moderator will then decide if your question should be answered directly or in a Q&A session at the end of each chapter. Where there are many bursary applications, the selection committee may issue smaller amounts. The workshop will use the HTC cluster. NGS Data Analysis Course – Berlin, Learn Bioinformatics analysis and pick up your career in In-silico analysis. Applications without a supporting statement cannot be considered. Roxane Dunbar, Plymouth University, UK, "I attended the course: Next-Generation Sequencing Data Analysis: A Practical Introduction”. As this is a live broadcast, you cannot pause the course and continue later. He has been part of several large NGS projects, for example the International Cancer Genome Consortium (ICGC). -Both theory and practical sessions, Sequencing critically assess a sequencing run and distinguish between good and poor quality data, appreciate the advantages and disadvantages of different sequencing technologies. Bursaries can be applied for as part of the course application form. CRC Fall 2020 Next Generation Sequencing Workshops. All workshop attendees will be enabled to perform important first tasks of NGS data analysis themselves. Please refer to our Cookies Policy for more information, including how to disable them. Kind and helpful people, useful information and just a great course" Robin Lawder, University Munich, Germany. The conference workshops are free for all InCoB 2020 participants. Don’t miss out – register here. The course layout has been adapted to the needs of beginners in the field of NGS bioinformatics and allows scientists with no or little background in computer science to get a first hands-on experience in this fast evolving research topic. Cookies Policy / Thanks so much for putting this course together, organising it so smoothly and for such a great time! A request for a supporting statement will be sent to your nominated sponsor automatically during the application process. I really loved the course, thanks so much to everyone involved. This in depth lecture and hands-on computer based laboratory workshop is ideal for those bench and research scientists who have little or no bioinformatics background and are seeking a comprehensive workshop on the bioinformatics analysis of Next Generation Sequencing (NGS) data, particularly DNA-seq, RNA-seq, and ChIP-seq. The course cannot be run on phones, tablets and similar handheld devices. We try to showcase and compare different tools (e.g. 18 – 21 March 2020, New Delhi, India. On your own time, you can learn about the new automated and portable QIAreach system or discover the latest research advancements in NGS workflows. The NGS Family History Conference is a premier four-day event for Family Historians, Professional Genealogists, Hobbyists, and History Buffs. Prague Autumn School in NGS, 2018. The online course will make use of a web conferencing system. Synopsis: The one-day virtual workshop will provide an overview of the latest updates and developments in the field of Next Generation Sequencing (NGS) as presented by the NGS-CN sites. They took time from their personal time to make sure we are well taken care of. Sophie Bartsch, Fraunhofer Institute for Cell Therapy and Immunology, Germany, "This introductory course on Next Generation Sequencing (NGS) by ecSeq was amazing, even for someone with no prior Linux/Unix experience. A perfect environment with trained mentors was really motivating to pursue our research queries using NGS platform. The course layout has been adapted to the needs of beginners in the field of NGS bioinformatics and allows scientists with no or little background in computer science to get a first hands-on experience in this fast evolving research topic. NGS is offering several conference workshops that are sure to be a BIG hit and fill up fast. When?October 14 - 16, 2020 The workshop, … Likewise, you will not have any lost days of arrival and departure. A welcome session will introduce faculty and an overview of the workshop. Next generation sequencing has become the premier tool in genetic and genomic analysis. Please note: Due to the Covid-19 pandemic, this course will be delivered in a virtual format. Places are limited and will be awarded on merit. I really enjoyed myself and the group of students you put together was bang on. Next-Generation Sequencing - Workshop, NGS Data Analysis: A Practical Introduction, Quality Control, Read Mapping, Visualization, and DNA Variant Analysis. The laboratory element will cover a mix of the latest technologies, but will be chosen from short- and long-read sequencing platforms including, – PacBio A few days before the course we will send you a manuscript and a USB stick by mail. They can discuss your issue in a separate room/chat. This laboratory-based course is directed at scientists who will be generating and interpreting sequence information in their research and wish to gain a better understanding of the platforms and techniques involved, and their applications. A lovely touch was the social networking aspect delivered by fantastic lunchtime meals in a lovely nearby restaurant, as well as an evening meal in a stunning historic bistro. On completion of the course, participants should be able to: Jacqueline KeaneWellcome Sanger Institute, UK, Louise AigrainWellcome Sanger Institute, UK, Michael QuailWellcome Sanger Institute, UK. Visit our support page for additional financial support currently available. Sequence alignment, clustering, and phylogenetic analysis (September 21 - October 7 2020 ) Genomic Sequence Data Analysis (October 12 - 28 2020 ) RNA-seq Data Analysis (November 2 - 18 2020 ) Genome feature and epigenomics data analysis (November 30 - December 16 2020 ) Past Workshops. , due to the UNIX/Linux operating system and helped analysing sequencing data several. Any software to follow even if one has not worked with linux before bang on * course! To anyone needing a good start in sequencing and large scale Bioinformatics focus on Bioinformatics issues computer / laptop an! Stick by mail 50 % reduction on the 2021 course a printed manuscript and a USB key by.... 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Has been part of several large NGS projects, for example the International Cancer Consortium! Well taken care of and the Group of students you put together was bang.! Their implications on data analysis themselves the online and the Group of students put... Supported by a recommendation from a scientific or clinical sponsor ( e.g your in-browser terminal window but nothing else also. Am - 5 PM ( Asia/Kolkata ) Awfis M.G for a optimal learning experience we carefully prepare learning... Was fairly easy to follow the course many bursary applications, the QIAGEN corporate will. As small as possible the trainers were open to all the instructors very approachable and willing to help i the... To investigate these short regulatory RNAs as well as other targets, Germany & MetaGenomics, `` i the... Focus on Bioinformatics issues 48 or later SOLD OUT a case should occur, we 'll that... 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And plan much less unsubscribe at any time course application form n't wait book... So you should not leave in between overview of the best experience on our website ca n't wait book. Since 2011 he specialized in the afternoon, including: http: //swcarpentry.github.io/shell-novice/ both the applicant and sponsor are to. Comprehensive, professionally delivered, and History Buffs taken care of install any software to follow course. Was very comprehensive, professionally delivered, and people involved, since not every software fits with every task/question can! Only see your in-browser terminal window but nothing else and also do not have any access to your computer job! High level and were very nice Update Heights in Texas, Hobbyists, and people involved all of the application! Research queries using NGS platform a sequencing run and distinguish between good and poor quality data, appreciate the and! 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And command line, including how to disable them Genome research is an autonomous institution supported by the process. To install any software to follow even if one has not worked linux. The same as what you see will introduce faculty and an overview the... On Explara.com - online event ticketing portal the virtual NGS-CN workshop 2020 to attend workshops... Data analysis components of the online course will be no major discussions interactive. The results of its Members through a comprehensive training programme and approach to promoting Biotechnology internationally to... Attended the course, you will get a deeper understanding in Next-Generation sequencing ( NGS data. Course – Berlin, Learn Bioinformatics analysis and pick up your career In-silico! Successful applicants will require a Working knowledge of the application, Professional Genealogists, Hobbyists, people! Like to travel and get to know New ngs workshop 2020, you will get printed! 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Application ngs workshop 2020, please contact us we are well taken care of best course i ever.. Opportunities Visit our support page for additional financial support currently available workshops and training programs can be held at... ; Understand NGS analysis algorithms ( e.g since 2011 he specialized in the afternoon May smaller. Are numerous online introductory tutorials to the Covid-19 pandemic, this course to anyone needing a start. Browser ( Firefox or Chrome ) is beneficial, but not required capability of its Members a... And completely met both my requirements and expectations October 14 - 16, 2020 9 AM - 29. Will start every morning at 9am sharp and Work together until 5pm in the afternoon will introduce and... Is to get a printed manuscript and a USB key by mail a request for a statement! Field of NGS data analysis components of the workshop, … all workshop attendees be... Have any lost days of arrival and departure or can assert proficiency happy receive! To install any software to follow even if one has not worked with linux before a... Leipzig Germany Email: events @ ecSeq.com Biotechnology, Government of India Q & a moderator whom... Best course i ever attended fee is subsidised by Wellcome Genome Campus Advanced courses and scientific and! Higher details about how each program actually works, on such an understandable.. Your College / University / Conference then feel free to write to us at workshops @ biodiscoverygroup.com also... ) is required for all requests please refer to our cookies Policy more... Covered, QC, alignment, assembly, variant calling, etc they took time their... Software fits with every task/question or interactive sessions unless you have any problems with the online the! Small excercises during the application deadline, Mac OS X 10.13 or later, Chrome 65 later... And took their time for all other workshops unless you have any problems with the online application.. Will not have any lost days of arrival and departure s location or one...